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RNA 5 Pyrophosphohydrolase (RppH)
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RNA 5 Pyrophosphohydrolase (RppH)
RNA 5 Pyrophosphohydrolase (RppH) from New England Biolabs
Be the first to write a review!
Citations:
(114)
$103.00 Inquire
from
New England Biolabs for
RNA 5 Pyrophosphohydrolase (RppH)
Product Specs
Company Info
Citations
Reviews
Product Specs
Item
RNA 5 Pyrophosphohydrolase (RppH)
Company
New England Biolabs
Price
$103.00 Inquire
Catalog Number
M0356S
Size
200 units
Applications
Functional Genomics
Temperature
-20 C
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New England Biolabs
240 County Road
Ipswich
,
Massachusetts
1938
United States
Phone
: 800-632-5227
800-632-7799
978-921-1350
Company Profile
Website:
http://www.neb.com
Citations (114)
(1)
53BP1 orchestrates sequence feature of RAG targets to balance DNA repair outcomes during V(D)J recombination
Sci Adv
May 22, 2026
Sha Luo, Hailiang Zha, Zifan Yang, Shuchan Li, Leyi Yu, Ruolin Qiao, Ruoxi Kong, Yifan Wang, Junhong Guan, Xuefei Zhang
the enriched run-on samples were incubated with end repair with T4 PNK (
NEB
,
M0201S
) and RppH (
NEB
,
M0356S
), followed by
ligation
the 5′ and 3′ RNA adaptors. Reverse transcription
PCR
was performed from the
(2)
Generation of precise and accurate engineered circRNAs using enzymatic ligation
Nucleic Acids Res
May 8, 2026
Amrita Singh, Adela Dujsikova, Noah Mueller, Y Grace Chen
In the second approach, pyrophosphates were removed by using 10 units of pyrophosphatase RppH (
NEB
#
M0356S
) on 2 µg of
in vitro
transcribed RNAs at 37°C for 30 min. The third approach used 5× or 10× excess guanosine
(3)
tRNA-derived RNA processing in sperm transmits non-genetically inherited phenotypes to offspring in C. elegans
Nature Communications
March 15, 2026
Nicholas S. Galambos, Olivia J. Crocker, Blair K. Schneider, Kennelly S. Allerton, Katrin E. Gross, Alexandra E. Schneider, Jared Lynch, Onur Yukselen, Alper Kucukural, Colin C. Conine
after complete ethanol removal, the pellet was reconstituted in
RNA 5′ Pyrophosphohydrolase (RppH
-
NEB
M0356S
) per manufacturers guidelines and incubated at 37 °C for 1 h. Following RppH treatment, small RNAs were
(4)
Chromatin-intrinsic mechanisms determine orientation-specific class switch recombination
Nature Communications
February 28, 2026
Sha Luo, Ruolin Qiao, Hailiang Zha, Leyi Yu, Xiaoling Shan, Shuchan Li, Zifan Yang, Aoyu Ma, Yaxin Cheng, Yao-Feng Zhao,
et al.
enriched run-on samples were incubated with hydroxyl repair with T4 PNK (
NEB
,
M0201S
) and RppH (
NEB
,
M0356S
), followed by ligating the 5′ and 3′ RNA adaptor.
RT-PCR
was performed from the adaptor-ligated RNA
(5)
Fragile nucleosomes are essential for RNA Polymerase II to transcribe in eukaryotes
bioRxiv
February 27, 2026
Lingbo Li, Samuel Hunter, Sonia Leach, Yonghua Zhuang, Haolin Liu, Junfeng Gao, Qianqian Zhang, Timothy J. Stasevich, Hiroshi Kimura, Robin Dowell,
et al.
repair, the RNA-bound beads were treated with T4 PNK (
NEB
#
M0201S
) and subsequently with RppH (
NEB
#
M0356S
). 5’ repaired RNA was ligated to reverse 5’ RNA adaptor (5’ UGGAAUUCUCGGGUGCCAAGG, final conc. 0.5 uM)
(6)
NAD+ capping of sibD transcripts in E. coli is mediated by its minimal promoter and enhanced by ppGpp
Nucleic Acids Research
February 24, 2026
Wuzhen Liu, Kefan Hu, Shiqi Nie, Zhang Feng, Qiongfang Li, Hailei Zhang, Shumin Liang, Jialin Peng, Shoudong Zhang, Zongwei Cai,
et al.
subjected to a decapping
assay
by incubating 20 ng of RNA with 0.5 μl NudC (
M0607S
,
NEB
) and 0.5 μl RppH (
M0356S
,
NEB
). For SibD RNAs, the decapped SibD RNAs were circularized with 30 U T4 RNA ligase (Thermo Fisher)
(7)
piRNAs safeguard splicing and RNA fidelity during heat shock
bioRxiv
February 12, 2026
Sehee Min, Johnny Cruz-Corchado, Veena Prahlad
into mRNA (>200 nt) and small RNA (<200 nt). Small RNA samples were treated with 10U RppH (
NEB
; Cat #
M0356S
) at 37°C for 30 min, then purified using the Zymo RNA Clean & Concentrator kit (
Zymo Research
; Cat #
R1015
).
(8)
Cell-type-specific RNA polymerase II activity maps in intact tissues provide a gateway to mammalian gene regulatory mechanisms in vivo
Developmental Cell
February 11, 2026
Gopal Chovatiya, Sean Y. Huang, Alex B. Wang, Philip Versluis, Chris K. Bai, Michael DeBerardine, Yu-Ching Liao, Judhajeet Ray, Abdullah Ozer, John T. Lis,
et al.
resuspending beads with nascent RNA in RppH reaction mix (10x ThermoPol buffer (
NEB
,
B9004S
), RppH (
NEB
,
M0356S
), SUPERase-In RNase Inhibitor) and incubating at 37°C for 45 minutes on thermomixer at 500 rpm. Following
(9)
Profiling active RNA polymerase II transcription start sites from total RNA by capped small RNA sequencing (csRNA-seq)
Nature Protocols
January 16, 2026
Mackenzie K. Meyer, Oluwadamilola J. Olanrewaju, Patricia Montilla-Perez, Anna L. McDonald, Eva M. Rickard, Francesca Telese, Christopher Benner, Marina I. Savenkova, Sascha H. Duttke
(
New England Biolabs
, cat. no.
M0525L
)
RNA 5’ Pyrophosphohydrolase (RppH
,
New England Biolabs
, cat. no.
M0356S
)2-Propanol (Sigma-Aldrich, cat. no. I9516–25ML) ! CAUTION: Highly flammable liquid and vapor. Causes
(10)
Sensitizing tumor response to topoisomerase I antibody drug conjugate by selective CDK7 inhibition
bioRxiv
January 16, 2026
Hyerim Jung, Yoonji Lee, Donghoon Yu, Yeejin Jeon, Hwankyu Kang, Dahun Um, Mooyoung Seo, Dongsik Park, Jeongjun Kim, Seung-Joo Lee,
et al.
qPRO-seq protocol (47). Following the
ligation
of the 3' adapter, samples were treated with RppH (
NEB
,
M0356S
) and PNK (
NEB
,
M0201S
), and 5' adapter was ligated. RNA was purified using streptavidin-coupled magnetic
(11)
A SET domain-containing protein and HCF-1 maintain transgenerational epigenetic memory
Nature Communications
January 9, 2026
Chenming Zeng, Giulia Furlan, Miguel Vasconcelos Almeida, Juan C. Rueda-Silva, Jonathan Price, Helena Santos-Rosa, Jingxiu Xu, Yan Kuang, Enric Cata Socias, Jonas Mars,
et al.
two-sided unpaired t-test. small RNA-seq and
sequencing
analysis Total RNAs were treated with RppH (
NEB
#
M0356S
)130, and small RNA libraries were prepared with a small RNA-seq Kit v4 with UDIs (Nextflex #NOVA-5132-31).
(12)
Hypoxia leads to reduced mito-nuclear gene expression and increased mtDNA transcriptional pausing in human cells
Communications Biology
January 8, 2026
Noam Shtolz, Sarah Dadon, Dan Mishmar
repaired with RNA 5′ pyrophosphohydrolase, followed by phosphorylation with
T4 polynucleotide kinase
(
M0356S
and
M0201S
, both from
NEB
). Next, the 5′ ends of the RNA molecules were ligated to the Rev5 RNA adapter
(13)
Phage-encoded small RNA hijacks host replication machinery to support the phage lytic cycle
Molecular Cell
December 18, 2025
Aviezer Silverman, Raneem Nashef, Reut Wasserman, Tamar Noy, Susan Born, Tianyou Yao, Yuncong Geng, Hila Rotbard, Adi Levkowitz, Yotam Kaufman,
et al.
inhibitor,Takara,Cat#2313A RNase T1,Boehringer,N/A DMS,Fluka,Cat#41610 RppH,
New England Biolabs
,Cat#
M0356S
5′-Phosphate-Dependent Exonuclease (TeX),Lucigen,Cat#TER51020 5-bromo-2′-deoxyuridine (BrdU),
Sigma Aldrich
(14)
The Incoming Influenza Genome Assembles a Host RBP Network that Orchestrates Viral RNA Synthesis
bioRxiv
December 11, 2025
Stephen Clarke, Deep B. Patel, Andrea Ascura, Caroline L. Wiser, Jennifer L. Pennise, Samantha M. Lisy, Manuel Ascano
University),N/A
T4 DNA ligase
,
New England Biolabs
,
M0202T
RNA 5’Pyrophosphohydrolase (RppH
),
New England Biolabs
,
M0356S
"
RNase inhibitor, Murine
",
New England Biolabs
,
M0314S
DNase I (RNase free
),
New England Biolabs
,
M0303S
TPCK-trypsin,
Thermo Fischer Scientific
(15)
CTCF couples long-range loop extrusion and diffusion to mediate a diverse Igκ repertoire
Nature Communications
December 11, 2025
Emma L. Bush, Brigette Berke-Reynolds, Kaitlyn M. Hutchins, Xinrui Yu, Jorge A. Colón-Rosado, Fujung Chang, John Curran, Jiaxin Yang, Liangliang Sun, Jianrong Wang,
et al.
Dynabeads MyOne Streptavidin C1 beads, treated with RNA 5’ Pyrophosphohydrolase (
New England Biolabs
,
M0356S
) and
T4 Polynucleotide Kinase
(
New England Biolabs
,
M0201S
), and sequentially ligated to 5’ and 3’ RNA
(16)
RG motifs promote piRNA-mediated gene silencing in C. elegans
Nucleic Acids Res
December 11, 2025
Dylan C Wallis, Carolyn M Phillips
polyphosphatase (Epicentre, RP8092H) (total small RNA samples) or 5′ RNA pyrophosphohydrolase (
NEB
M0356S
) (IP samples) and ligated to 3′ pre-adenylated adapters with truncated T4 RNA ligase (
NEB
M0373L
). Small
(17)
A new role for PHYHD1 and related dioxygenases: demethylation of 2'-O-methylated nucleosides
Nucleic Acids Res
December 11, 2025
Justas Stonkus, Rasa Rutkienė, Rita Meškienė, Martyna Jasiūnienė, Agota Aučynaitė, Laura Kalinienė, Justas Lazutka, Darius Balčiūnas, Giedrius Vilkaitis, Rolandas Meškys
hydrolysis Purified mRNA was first incubated with
RNA 5′ pyrophosphohydrolase (RppH
, New England Biolabs, USA, #
M0356S
) in
NEB
buffer 2 according to the manufacturer’s instructions. Total RNA and decapped mRNA were first
(18)
Argonaute-siRNA loading via the RNA-binding protein RDE-4 in C. elegans
Current Biology
December 1, 2025
Thiago L. Knittel, Brooke E. Montgomery, Reese A. Sprister, Colin N. Magelky, Margaret J. Smith, Maritza Soto-Ojeda, Melissa Guthrie, Carolyn M. Phillips, Taiowa A. Montgomery
by
Thermo Fisher Scientific
",Cat#
NW04127BOX
RNA 5′ Pyrophosphohydrolase,
New England Biolabs
,Cat#
M0356S
Alt-R™ S.p. Cas9 Nuclease V3
,
Integrated DNA Technologies
,Cat#
1081058
Critical commercial
assays
,Critical
(19)
TAF1 is required for fetal but not adult hematopoiesis in mice
Developmental Cell
November 3, 2025
Fan Liu, Jingyin Yue, Francesco Tamiro, Jun Sun, Pradeep Kumar Reddy Cingaram, Krystal Lisa Hossack, Concepcion Martinez Caja, Ye Xu, Chuan Chen, Felipe Beckedorff,
et al.
purified by streptavidin beads M-280 (
Invitrogen
,
11205D
), and the 5' cap was removed using RppH (
NEB
,
M0356S
).
T4 polynucleotide kinase
(
NEB
,
M0201
) was then used to repair the 5' hydroxyl terminus. Following
(20)
Argonautes and small RNAs associated with nematode programmed DNA elimination
bioRxiv
October 27, 2025
Maxim V. Zagoskin, Yuanyuan Kang, Richard E. Davis, Jianbin Wang
°C). To enable
cloning
of siRNAs carrying 5′ triphosphates, samples were treated with RppH (
NEB
, catalog #
M0356S
) in ThermoPol buffer for 1 h at 37 °C to remove cap and convert 5′ di- and triphosphates to monophosphates
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RNA 5 Pyrophosphohydrolase (RppH) from New England Biolabs
Price
$103.00
Inquire
Product Specs
Company Info
Citations
Reviews
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