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RNA 5 Pyrophosphohydrolase (RppH)
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RNA 5 Pyrophosphohydrolase (RppH)
RNA 5 Pyrophosphohydrolase (RppH) from New England Biolabs
Be the first to write a review!
Citations:
(121)
$103.00 Inquire
from
New England Biolabs for
RNA 5 Pyrophosphohydrolase (RppH)
Product Specs
Company Info
Citations
Reviews
Product Specs
Item
RNA 5 Pyrophosphohydrolase (RppH)
Company
New England Biolabs
Price
$103.00 Inquire
Catalog Number
M0356S
Size
200 units
Applications
Functional Genomics
Temperature
-20 C
Add to Compare List
New England Biolabs
240 County Road
Ipswich
,
Massachusetts
1938
United States
Phone
: 800-632-5227
800-632-7799
978-921-1350
Company Profile
Website:
http://www.neb.com
Citations (121)
(21)
CTCF couples long-range loop extrusion and diffusion to mediate a diverse Igκ repertoire
Nature Communications
December 11, 2025
Emma L. Bush, Brigette Berke-Reynolds, Kaitlyn M. Hutchins, Xinrui Yu, Jorge A. Colón-Rosado, Fujung Chang, John Curran, Jiaxin Yang, Liangliang Sun, Jianrong Wang,
et al.
Dynabeads MyOne Streptavidin C1 beads, treated with RNA 5’ Pyrophosphohydrolase (
New England Biolabs
,
M0356S
) and
T4 Polynucleotide Kinase
(
New England Biolabs
,
M0201S
), and sequentially ligated to 5’ and 3’ RNA
(22)
RG motifs promote piRNA-mediated gene silencing in C. elegans
Nucleic Acids Res
December 11, 2025
Dylan C Wallis, Carolyn M Phillips
polyphosphatase (Epicentre, RP8092H) (total small RNA samples) or 5′ RNA pyrophosphohydrolase (
NEB
M0356S
) (IP samples) and ligated to 3′ pre-adenylated adapters with truncated T4 RNA ligase (
NEB
M0373L
). Small
(23)
The Incoming Influenza Genome Assembles a Host RBP Network that Orchestrates Viral RNA Synthesis
bioRxiv
December 11, 2025
Stephen Clarke, Deep B. Patel, Andrea Ascura, Caroline L. Wiser, Jennifer L. Pennise, Samantha M. Lisy, Manuel Ascano
University),N/A
T4 DNA ligase
,
New England Biolabs
,
M0202T
RNA 5’Pyrophosphohydrolase (RppH
),
New England Biolabs
,
M0356S
"
RNase inhibitor, Murine
",
New England Biolabs
,
M0314S
DNase I (RNase free
),
New England Biolabs
,
M0303S
TPCK-trypsin,
Thermo Fischer Scientific
(24)
Argonaute-siRNA loading via the RNA-binding protein RDE-4 in C. elegans
Current Biology
December 1, 2025
Thiago L. Knittel, Brooke E. Montgomery, Reese A. Sprister, Colin N. Magelky, Margaret J. Smith, Maritza Soto-Ojeda, Melissa Guthrie, Carolyn M. Phillips, Taiowa A. Montgomery
by
Thermo Fisher Scientific
",Cat#
NW04127BOX
RNA 5′ Pyrophosphohydrolase,
New England Biolabs
,Cat#
M0356S
Alt-R™ S.p. Cas9 Nuclease V3
,
Integrated DNA Technologies
,Cat#
1081058
Critical commercial
assays
,Critical
(25)
TAF1 is required for fetal but not adult hematopoiesis in mice
Developmental Cell
November 3, 2025
Fan Liu, Jingyin Yue, Francesco Tamiro, Jun Sun, Pradeep Kumar Reddy Cingaram, Krystal Lisa Hossack, Concepcion Martinez Caja, Ye Xu, Chuan Chen, Felipe Beckedorff,
et al.
purified by streptavidin beads M-280 (
Invitrogen
,
11205D
), and the 5' cap was removed using RppH (
NEB
,
M0356S
).
T4 polynucleotide kinase
(
NEB
,
M0201
) was then used to repair the 5' hydroxyl terminus. Following
(26)
Cappable-Seq reveals the transcriptional landscape of stress responses in the bacterial endosymbiont Wolbachia
Microb Genom
October 27, 2025
Youseuf Suliman, Zhiru Li, Amit Sinha, Philip D. Dyer, Catherine S. Hartley, Laurence Ettwiller, Alistair C. Darby, Clotilde K. Carlow, Benjamin L. Makepeace
RNA to 2.2 µl of 10X ThermoPol buffer (NEB product number B9004) and 2 µl RppH (
NEB
product number
M0356S
), followed by
incubation
at 37 °C for 1 h. Next, 1 µl of
1 : 10
diluted proteinase K was added to the
(27)
Argonautes and small RNAs associated with nematode programmed DNA elimination
bioRxiv
October 27, 2025
Maxim V. Zagoskin, Yuanyuan Kang, Richard E. Davis, Jianbin Wang
°C). To enable
cloning
of siRNAs carrying 5′ triphosphates, samples were treated with RppH (
NEB
, catalog #
M0356S
) in ThermoPol buffer for 1 h at 37 °C to remove cap and convert 5′ di- and triphosphates to monophosphates
(28)
The MLLT3 YEATS domain is a dual reader of histone marks (H3K9/18/27ac/cr) and ncRNA (7SK), linking epigenetic and RNA signaling to regulate hematopoiesis
bioRxiv
September 11, 2025
Adam Boulton, Ashish Kabra, Nicholas Achille, Emmalee R. Adelman, Dimitrios G. Anastasakis, Felipe Beckedorff, Pradeepkumar Cingaram, Ying Zhang, Benjamin Leach, Ramin Shiekhattar,
et al.
purified by streptavidin beads M-280 (
Invitrogen
,
11205D
), and the 5’ cap was removed using RppH (
NEB
,
M0356S
).
T4 polynucleotide kinase
(
NEB
,
M0201
) was then used to repair the 5’ hydroxyl terminus. Following
(29)
Integrator promotes the association of TFIID and RNA polymerase II to maintain pluripotency during development
Molecular Cell
August 7, 2025
Raghu Ram Edupuganti, Felipe Beckedorff, Pradeep Kumar Reddy Cingaram, Saeid Mohammad Parast, Jingyin Yue, Gary LeRoy, Monica Guiselle Valencia, Sadat Dokaneheifard, Helena Gomes Gomes Dos Santos, Omar Lopez Ocejo,
et al.
Gold,
InvivoGen
,
ant-hg-1
Lipofectamine 3000
,
Invitrogen
,100022052 Biotin-11-NTPs,PerkinElmer,NEL54(2/3/4/5)001 RppH,
NEB
,
M0356S
PNK,
NEB
,
M0201L
SuperScript III,
Invitrogen
,
18080051
Salmon Sperm DNA,
Thermo Scientific
,
15632011
TSKgel-DEAE-5PW,TOSO
(30)
Biochemical analysis of human eIF4E-DCP2 interaction: Implications for the relationship between translation initiation and decapping
PLoS One
August 1, 2025
Zachary F. Mandell, Jeff Coller
incubating the 5’ triphosphate RNA oligos with the bacterial
RNA 5’ pyrophosphohydrolase, RppH
(
NEB
cat #
M0356S
), then purified using silica-
membrane
spin columns. Each of the RNA oligos was of the sequence 5’-AGGAAAUAAGAGAGAAAAGAAGAGUAAGAAGAAAUAUAAGAGC-3’. Recombinant
(31)
Structure and biochemistry-guided engineering of an all-RNA system for DNA insertion with R2 retrotransposons
Nat Commun
July 2, 2025
KeHuan K. Edmonds, Max E. Wilkinson, Daniel Strebinger, Hongyu Chen, Blake Lash, Clarissa C. Schaefer, Shiyou Zhu, Dangliang Liu, Shai Zilberzwige-Tal, Alim Ladha,
et al.
RP-
HPLC
. For 5’ modification,
in vitro
transcribed RNA (uncapped) were first digested with RppH (
NEB
,
M0356S
) to yield 5P-mRNA, which were then ligated to chemically synthesized (and capped) oligonucleotides with
(32)
Chemical and topological design of multicapped mRNA and capped circular RNA to augment translation
Nature Biotechnology
July 1, 2025
Hongyu Chen, Dangliang Liu, Abhishek Aditham, Jianting Guo, Jiahao Huang, Franklin Kostas, Kamal Maher, Mirco J. Friedrich, Ramnik J. Xavier, Feng Zhang,
et al.
oligonucleotides to mRNAs The 5′-triphosphorylated mRNA generated by IVT was first treated with RppH (
NEB
,
M0356S
) according to the manufacturer’s protocol to generate 5P-mRNA and purified with the Monarch
RNA cleanup
(33)
tRNA-derived RNA processing in sperm transmits non-genetically inherited phenotypes to offspring in C. elegans
ResearchSquare
June 6, 2025
Nicholas S. Galambos, Olivia J. Galambos, Blair K. Schneider, Kennelly S. Schneider, Katrin E. Allerton, Alexandra E. Schneider, Alexandra Schneider, Jared Yukselen, Alper Kucukural, Colin C. Kucukural
after complete ethanol removal, the pellet was reconstituted in
RNA 5´ Pyrophosphohydrolase (RppH
-
NEB
M0356S
) per manufacturers guidelines and incubated at 37°C for one hour. Following RppH treatment, small RNAs
(34)
Nucleoporins shape germ granule architecture and balance small RNA silencing pathways
Nat Commun
May 8, 2025
Kun Shi, Ying Zhang, Zhenzhen Du, Symonne C. Liu, Ivan Leon, Xinyu Fan, Heng-Chi Lee, Donglei Zhang
in 15 μL of nuclease-free water. The RNA samples underwent treatment with RppH (
New England Biolabs
,
M0356S
) to convert 22G-RNA 5′ triphosphates to monophosphates. RNA was then concentrated using the RNA Clean
(35)
Decoding m6Am by simultaneous transcription-start mapping and methylation quantification
Elife
March 31, 2025
Jianheng Fox Liu, Ben R Hawley, Luke S Nicholson, Samie R Jaffrey
eluate was cleaned again by ethanol-AMPure XP. The DTB-GTP cap was removed using 0.5 U/µl RppH (
NEB
#
M0356S
) in 1 X ThermoPol buffer (NEB #
M0356S
) and incubating at 37 °C for 1 hr. The resulting 5’-monophosphate
(36)
Decoding m6Am by simultaneous transcription-start mapping and methylation quantification
Elife
March 31, 2025
Jianheng Fox Liu, Ben R Hawley, Luke S Nicholson, Samie R Jaffrey
eluate was cleaned again by ethanol-AMPure XP. The DTB-GTP cap was removed using 0.5 U/µl RppH (
NEB
#
M0356S
) in 1 X ThermoPol buffer (NEB #
M0356S
) and incubating at 37 °C for 1 hr. The resulting 5’-monophosphate
(37)
Mouse promoters are characterised by low occupancy and high turnover of RNA polymerase II
Molecular Systems Biology
March 31, 2025
Kasit Chatsirisupachai, Christina J I Moene, Rozemarijn Kleinendorst, Elisa Kreibich, Nacho Molina, Arnaud Krebs
,
New England Biolabs
,
M0204L
EGTA
,
Sigma-Aldrich
,E3889
RNA 5’ Pyrophosphohydrolase (RppH
) - 200 units,
New England Biolabs
,
M0356S
Superase-In RNase Inhibitor,Thermo Fisher,
Q5 High-Fidelity DNA Polymerase
—100 units,
New England Biolabs
,
M0491S
Sarkosyl,Sigma-Aldrich,61739 SYBR
(38)
Spatiotemporal single-cell architecture of gene expression in the Caenorhabditis elegans germ cells
Cell Discov
March 18, 2025
Lili Li, Xiaoyin Tang, Xuanxuan Guo, Di Rao, Lin Zeng, Junchao Xue, Shuxian Liu, Shikui Tu, En-Zhi Shen
procedure
was performed as described previously98. Briefly,
RNA 5′ Pyrophosphohydrolase (RppH
) (
NEB
,
M0356S
) was used to trim the 5′ triphosphate of endogenous 22G-RNAs to monophosphate. The 3′ and 5′ adapters
(39)
The pseudorabies virus UL13 protein kinase triggers phosphorylation of the RNA demethylase FTO, which is associated with FTO-dependent suppression of interferon-stimulated gene expression
Journal of Virology
February 25, 2025
Ruth Verhamme, Robert J. J. Jansens, Jianheng Liu, Fien Van Raemdonck, Cliff Van Waesberghe, Luke Nicholson, Samie R. Jaffrey, Herman W. Favoreel
enrichment, the RNA fragments were eluted into water. To ligate the 5′ adapter, we used RppH (
NEB
#
M0356S
) to release the 3′-Desthiobiotin caps, which results in monophosphate 5′ ends ready for
ligation
. We
(40)
Decreased SynMuv B gene activity in response to viral infection leads to activation of the antiviral RNAi pathway in C. elegans
PLoS Biol
January 29, 2025
Ashwin Seetharaman, Himani Galagali, Elizabeth Linarte, Mona H. X. Liu, Jennifer D. Cohen, Kashish Chetal, Ruslan Sadreyev, Alex J. Tate, Taiowa A. Montgomery, Gary Ruvkun
triphosphates to monophosphates following the manufacturer’s recommendations (
New England Biolabs
, cat#
M0356S
) [77]; 16 to 30-nt small RNAs were size selected on a 17% polyacrylamide/urea gel and purified using
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RNA 5 Pyrophosphohydrolase (RppH) from New England Biolabs
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$103.00
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Product Specs
Company Info
Citations
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