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RNA
RNA
Alt-R™CRISPR Cas9 tracrRNA, ATTO™ 550
Alt-R™CRISPR Cas9 tracrRNA, ATTO™ 550 from Integrated DNA Technologies
(1)
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Citations:
(61)
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Integrated DNA Technologies for
Alt-R™CRISPR Cas9 tracrRNA, ATTO™ 550
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Description
Universal 67mer tracrRNA that contains proprietary chemical modifications conferring increased nuclease resistance, labeled with ATTO™ 550
Product Specs
Company Info
Citations
Reviews
Product Specs
Item
Alt-R™CRISPR Cas9 tracrRNA, ATTO™ 550
Company
Integrated DNA Technologies
Price
Supplier Page
View Company Product Page
Catalog Number
1075927
Applications
Gene Expression and Molecular Cloning, CRISPR
Type
CRISPR/Cas9 Vectors
Conjugate/Tag/Label
ATTO™ 550
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Integrated DNA Technologies
1710 Commercial Park
Coralville
,
Iowa
52241
United States
Phone
: 800-328-2661
Company Profile
Website:
http://www.idtdna.com
Citations (61)
(1)
A standardized approach to test missense PNPLA1 rare genetic variants of uncertain significance in epidermal differentiation disorders
JID Innovations
March 1, 2026
Nuria Pell, Pauline Bernard, Séverine Courrech, Lukas Opalka, Aina Millán-Sánchez, Elise Levy, Séverine Garnier, Cyrielle Clément, Pauline Le Faouder, Katerina Vávrová,
et al.
targeting a specific region of
PNPLA1
sequence and a trans-activating
CRISPR
RNA-ATTO 550 (200 mM, number
1075927
,
Integrated DNA Technologies
). We designed 4 different
CRISPR
RNA sequences using the software tool
(2)
The SETD2 L1609P mutation found in leukemia disrupts methyltransferase activity and reduces histone H3K36 trimethylation
Journal of Biological Chemistry
February 5, 2026
Christina Michail, Jérémy Berthelet, Ariel E. Mechaly, Linh-Chi Bui, Haopeng Yang, Duo Cai, Amira Al Mahi, Aowei Xie, Valeria Bisio, Valentina Sirri,
et al.
ribonucleoprotein (RNP). Specifically, crRNA (IDT) targeting
SETD2
was annealed with Atto550-labeled tracrRNA (
1075927
,
IDT
) and subsequently formed RNP with
Alt-R S.p. Cas9 Nuclease V3
(
1081058
,
IDT
) prior to
electroporation
.
(3)
Targeting PLK1 Reduces MMP10 to Enhance Radiosensitivity in HPV— Head and Neck Cancer
Clinical Cancer Research
January 16, 2026
Julianna Korns, Maria A. Lehn, Shreya Shyamsunder, Mario Medvedovic, Stephanie M. Bryant, Mathieu G. Sertorio, Maya Ridinger, Trisha M. Wise-Draper, Vinita Takiar
Crispr-Cas9
Knockout
Guide RNAs (gRNA) for MMP10 were combined with a Trac-ATTO 550 RNA (
IDT
, Cat#
1075927
) and incubated at 95°C for 5 minutes. Cas9 (
IDT
, Cat#
1081058
), Cas9 PLUS (
ThermoFisher
, Cat#
CMAX00003
),
(4)
Molecular basis of XPF-ERCC1 targeting to SLX4-dependent DNA repair pathways
Nature Communications
December 16, 2025
Junjie Feng, Peter R. Martin, Szymon Kowalski, Maxime Lecot, Nora B. Cronin, Teige Matthews-Palmer, Wojciech Niedzwiedz, Basil J. Greber
Technologies, cat. no. 10008100),
Alt-R CRISPR-Cas9 tracrRNA, ATTO™ 550
(
Integrated DNA Technologies
, cat. no.
1075927
) and
Alt-R CRISPR-Cas9 crRNA
targeting exon 1 of the CIP2A locus (
ERCC4
crRNA: TGTCGCTCGTACTCCAGCAG)
(5)
A phenotypic brain organoid atlas and biobank for neurodevelopmental disorders
Cell Stem Cell
December 4, 2025
Lu Wang, Yuji Nakamura, Junhao Li, David Sievert, Yang Liu, Toan Nguyen, Prudhvi Sai Jetti, Ethan Thai, Rachel Yibei Zhou, Jiaming Weng,
et al.
,
Integrated DNA Technologies
,Cat#
1081060
"
Alt-R™CRISPR-Cas9 tracrRNA, ATTO™ 550
",
Integrated DNA Technologies
,Cat#
1075927
Alt-R™ HDR Enhancer V2
,
Integrated DNA Technologies
,Cat#10007921 Corning®Matrigel® Basement Membrane
(6)
Distinct roles of Atf3 , Zfp711 and Bcl6b in early embryonic hematopoietic and endothelial lineage specification
Development
December 1, 2025
Ridvan Cetin, Giulia Picco, Jente van Staalduinen, Eric Bindels, Remco Hoogenboezem, Gregory van Beek, Mathijs A. Sanders, Yaren Fidan, Ahmet Korkmaz, Joost Gribnau,
et al.
guidelines of
IDT
[version 6 (v6)] followed downstream analysis with
Alt-R CRISPR-Cas9 tracrRNA. ATTO 550
(
1075927
),
Alt-R CRISPR-Cas9 crRNA
,
Alt-R S.p. Cas9 Nuclease V3
, (
1081058
) and
1075927
Lipofectamine CRISPRMAX
(7)
Towards antibody-based immunotherapy development for platinum-resistant high-grade serous ovarian cancer
Scientific Reports
November 28, 2025
Zivile Giedraityte, Noora Aarnio, Faez Amokrane Nait Mohamed
\setlength{\oddsidemargin}{-69pt} \begin{document}$$^\textrm{TM}$$\end{document} 550 modified tracrRNA (catalog number:
1075927
) was purchased from
Integrated DNA Technologies
(USA) for enrichment of
transfected
cells. Single
clones
(8)
The CIP2A-TOPBP1 axis facilitates mitotic DNA repair via MiDAS and MMEJ
Nature Communications
November 27, 2025
Peter R. Martin, Jadwiga Nieminuszczy, Zuza Kozik, Nihal Jakub, Szymon Kowalski, Maxime Lecot, Julia Vorhauser, Karen A. Lane, Alexandra Kanellou, Jörg Mansfeld,
et al.
ribonucleoprotein delivery.
Alt-R™ S.p. Cas9-GFP V3
(
IDT
, 10008100),
Alt-R™ CRISPR-Cas9 tracrRNA, ATTO™ 550
(
IDT
,
1075927
) and
Alt-R™ CRISPR-Cas9 crRNA
targeting exon 1 of the
CIP2A
locus (
CIP2A
crRNA: GGAGTCCATTGCACCGGCCGCGG)
(9)
Atypical contribution of caspase-3 to melanoma cancer cell motility by regulation of coronin 1B activity
Cell Death Dis
October 6, 2025
Kevin Berthenet, Serena Diazzi, Catherine Jamard, Kinga B. Stopa, Clara Gil, Stefan Dragan, Deborah Fanfone, Trang TM. Nguyen, Nathalie Al, Francois Virard,
et al.
in Table S1. The
CASP3
-targeting
CRISPR-Cas9
crRNA was duplexed with the
CRISPR-Cas9
tracrRNA (
IDT
,
1075927
) by heating at 95 °C for 5 min. This duplex was then complexed with recombinant Cas9 protein (
Biotechne
,
(10)
G-protein-coupled receptor ADGRG1 drives a protective microglial state in Alzheimer's disease through MYC activation
Neuron
October 1, 2025
Beika Zhu, Andi Wangzhou, Diankun Yu, Tao Li, Rachael Schmidt, Stacy L. De Florencio, Lauren Chao, Alicia L. Thurber, Minqi Zhou, Zeina Msheik,
et al.
targeting exon 7 of the ADGRG1 gene locus. Equal amount of crRNA and ATTO™550- labeled tracrRNA (
IDT
,
1075927
) were mixed to a final concentration of 100 μM, heated to 95 °C for 5 minutes, and then cooled to room
(11)
Microglia regulate GABAergic neurogenesis in prenatal human brain through IGF1
Nature
August 6, 2025
Diankun Yu, Samhita Jain, Andi Wangzhou, Beika Zhu, Wenyuan Shao, Elena J. Coley-O’Rourke, Stacy De Florencio, JaeYeon Kim, Jennifer Ja-Yoon Choi, Mercedes F. Paredes,
et al.
Alt-R
CRISPR–Cas9
guide RNA (IDT). Equal amounts of
CRISPR
RNA and ATTO 550 labelled tracrRNA (
IDT
;
1075927
) were mixed to a final concentration of 100 μΜ, heated to 95 °C for 5 min and then cooled to room temperature
(12)
Classically activated macrophages undergo functionally significant nucleotide metabolism remodelling driven by nitric oxide
Nature Metabolism
August 4, 2025
Steven V. John, Gretchen L. Seim, Billy J. Erazo-Flores, James A. Votava, Uzziah S. Urquiza, Nicholas L. Arp, John Steill, Jack Freeman, Lauren N. Carnevale, Isaiah Roberts,
et al.
of
Alt-R S.p. HiFi Cas9 Nuclease V3
(
IDT
:
1081060
), Alt-R
CRISPR–Cas9
gRNA (IDT), and ATTO 550 (
IDT
:
1075927
). The following gRNA sequences were used: HPRT: ACGGGGGACATAAAAGTTAT Nos2−/−
RAW 264.7 cells
that were
(13)
Lestaurtinib's antineoplastic activity converges on JAK/STAT signaling to inhibit treatment naïve and therapy resistant forms ovarian cancer
NPJ Precis Oncol
July 11, 2025
Esther P. B. Rodman, Michael J. Emch, Xiaonan Hou, Archit Bajaj, Nicole A. Pearson, August J. John, Yamillie Ortiz, Adam D. Bass, Saloni Singh, Gustavo Baldassarre,
et al.
high-confidence guide RNAs88. Guide RNAs, along with
Alt-R CRISPR-Cas9-tracrRNA
5’ATTO550 (tracrRNA, #
1075927
) and Alt-R Cas9 protein (#
1081058
), were purchased from
IDT
. Cells were plated in 10 cm dishes at approximately
(14)
The Sotos syndrome gene Nsd1 safeguards developmental gene enhancers poised for transcription by maintaining the precise deposition of histone methylation
Journal of Biological Chemistry
March 19, 2025
Jie Li, Zhucui Li, Jiekai Yin, Yinsheng Wang, Deyou Zheng, Ling Cai, Gang Greg Wang
universal tracrRNA (transactivating crRNA) labeled with the ATTO 500 fluorescent dye at its 5′end (
IDT
cat#
1075927
) were synthesized as RNA oligos and then annealed to form duplex, followed by
incubation
with the Cas9
(15)
The pseudorabies virus UL13 protein kinase triggers phosphorylation of the RNA demethylase FTO, which is associated with FTO-dependent suppression of interferon-stimulated gene expression
Journal of Virology
February 25, 2025
Ruth Verhamme, Robert J. J. Jansens, Jianheng Liu, Fien Van Raemdonck, Cliff Van Waesberghe, Luke Nicholson, Samie R. Jaffrey, Herman W. Favoreel
from IDT (design ID: CD.Cas9.FWJR4400.BS). The custom crRNA and the trans-activating RNA (tracrRNA) (
1075927
,
IDT
) were annealed by heating to 95°C for 5 minutes. The
CRISPR-Cas9
RNP was formed by mixing the annealed
(16)
A Phenotypic High-Throughput Screen Identifies Small Molecule Modulators of Endogenous RGS10 in BV-2 Cells
Journal of Medicinal Chemistry
November 28, 2024
Shwetal Talele, Stephanie Gonzalez, Julia Trudeau, Ahmad Junaid, Cody A Loy, Ryan A. Altman, Benita Sjögren
purchased from
Integrated DNA Technologies
(
IDT
; San Diego, CA).
Alt-R CRISPR-Cas9 tracrRNA–ATTO 550
(no.
1075927
) and
Alt-R S.p. Cas9 Nuclease V3
(#
1081058
) were purchased from
IDT
. Design for HiBiT donor template
(17)
Glycogen myophosphorylase loss causes increased dependence on glucose in iPSC-derived retinal pigment epithelium
The Journal of biological chemistry
August 1, 2024
Basu B, Karwatka M, China B, McKibbin M, Khan K, Inglehearn CF, Ladbury JE, Johnson CA.
guide sequence and the fluorescently-labeled ATTO-550 tracrRNA (Integrated DNA Technologies (
IDT
),
1075927
) were incubated as per manufacturer’s instructions to obtain a functional guide RNA duplex. The Cas9-GFP
(18)
G-quadruplexes are a source of vulnerability in BRCA2 deficient granule cell progenitors and medulloblastoma
bioRxiv
July 25, 2024
Danielle L. Keahi, Mathijs A. Sanders, Matthew R. Paul, Andrew L. H. Webster, Yin Fang, Tom F. Wiley, Samer Shalaby, Thomas S. Carroll, Settara C. Chandrasekharappa, Carolina Sandoval-Garcia,
et al.
“sgPif1-H”). gRNAs were complexed in oligo duplex buffer (IDT) with a tdTomato-labeled tracrRNA (
IDT
#
1075927
) prior to complexing with SpCas9 V3 (IDT #1081059).
CRISPR
-RNP complexes were delivered to primary
medulloblastoma
(19)
A PRMT5-ZNF326 axis mediates innate immune activation upon replication stress
Science Advances
June 7, 2024
Phuong Mai Hoang, Denis Torre, Patrick Jaynes, Jessica Ho, Kevin Mohammed, Erik Alvstad, Wan Yee Lam, Vartika Khanchandani, Jie Min Lee, Chin Min Clarissa Toh,
et al.
Donor oligos and gRNA sequences are listed in table S3. The
CRISPR
RNA was mixed with tracrRNA (
IDT
, #
1075927
) to make gRNA complex at 50 μM final concentration. The gRNA complex was combined with Cas9 nuclease
(20)
CHMP2A regulates broad immune cell-mediated antitumor activity in an immunocompetent in vivo head and neck squamous cell carcinoma model
Journal for ImmunoTherapy of Cancer
May 3, 2024
Jiyoung Yun, Robert Saddawi-Konefka, Benjamin Goldenson, Riyam Al-Msari, Davide Bernareggi, Jaya L Thangaraj, Shiqi Tang, Sonam H Patel, Sarah M Luna, J Silvio Gutkind,
et al.
200 µM. Designed crRNAs were synthesized with nonspecific
Alt-R CRISPR-Cas9 tracrRNA ATTO 550
(
IDT
#
1075927
) into gRNAs. 8×105 4MOSC1 and 4MOSC2 cells were each nucleofected using the Amaxa 2D nucleofector (Lonza)
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Reviews
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(1)
3/15/2023
Good for Selecting Cas9-RNP Targeted Cell
YONG M
tracrRNA, ATTO™ 550 was used to form gRNA and RNP complex with Cas9 protein. After 24 hours of transfection. RNP-targeted cells were sorted by FACS to separate successfully transfected fluorescent ...
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Alt-R™CRISPR Cas9 tracrRNA, ATTO™ 550 from Integrated DNA Technologies
Supplier Page
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