Simple Mouse Genotyping PCR Kit

Carnegie Institution for Science
Embryology
Predoc fellow

Overall

Quality of Results

Ease-of-Optimization

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Company:

Clontech

Product Name:

Terra PCR Direct Polymerase Mix

Catalog Number:

639271

We switched our mouse genotyping PCR system from promega Gotaq flexi to Clontech Terra direct PCR. The new clontech kit can use mouse tissue directly for PCR and does not require optimization. It always give specific DNA band and can amplify high GC content fragment easily.

Experimental Design and Results Summary

Application

Mouse genotyping

Starting Material

1mm mouse tail

Protocol Overview

1) incubate mouse tail with 180 ul 50 mM NaOH for 10mins at 95C 2) Directly take 1ul crude tissue extract in 20 ul PCR system (Kit suggests using 20ul of 1M Tris-HCl ph8.0 to neutralize the extraction, we avoid this step). 3) Following instruction, PCR amplify 33-35 cycles and then take 1/4 for gel analysis.

Tips

Kit suggests 50 ul PCR system and include 800 reactions. We found 20ul, or even 10 ul PCR works very good in the lab. Generally I use 10 ul for my mouse genotyping, which means one kit can run 4000 PCR reactions.

Results Summary

Simple handing and it always give me specific DNA bands.

Additional Notes

None

Image Gallery

Summary

The Good

Quick, robust and reproducible results

The Bad

It can only be used for genotyping, not for cloning

The Bottom Line

Save time, avoid optimization and amplify very difficult DNA fragments

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