ddSEQ Single-Cell ATAC-Seq Index Kit 12009360 from Bio-Rad

Product Specs
ItemddSEQ Single-Cell ATAC-Seq Index Kit
CompanyBio-Rad
Price Supplier Page View Company Product Page
Catalog Number12009360
Quantity1
ApplicationsRegulation of gene expression, cell fate determination, deconvolute cell types within complex heterogeneous samples, validate single-cell RNA-Seq data
Detection Range400-5000 cells per sample
Sample TypeNuclei or whole cells
SensitivityGreater than 65% capture efficiency, high sensitivity and specificity
Assay Time<8 hours
Research AreaEpigenetics

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Bio-Rad

Bio-Rad Laboratories, Inc. Life Science Research Group 2000 Alfred Nobel Drive

Hercules, California 94547

United States

Phone: 800-424 6723
800-879 2289

Company Profile

Website: http://discover.bio-rad.com

(1) Systematic benchmarking of single-cell ATAC-sequencing protocolsNature BiotechnologyJune 1, 2024Florian V. De Rop, Gert Hulselmans, Chris Flerin, Paula Soler-Vila, Albert Rafels, Valerie Christiaens, Carmen Bravo González-Blas, Domenica Marchese, Ginevra Caratù, Suresh Poovathingal, et al.prepared using a SureCell ATAC-Seq Library Prep kit (17004620, Bio-Rad) and SureCell ddSEQ Index kit (12009360, Bio-Rad). Bead barcoding and sample indexing were performed in a C1000 Touch thermal cycler with a

(2) Cell of origin epigenetic priming determines susceptibility to Tet2 mutationNature CommunicationsMay 21, 2024Giulia Schiroli, Vinay Kartha, Fabiana M. Duarte, Trine A. Kristiansen, Christina Mayerhofer, Rojesh Shrestha, Andrew Earl, Yan Hu, Tristan Tay, Catherine Rhee, et al.prepared using the SureCell ATAC-Seq Library Prep Kit (17004620, Bio-Rad) and SureCell ddSEQ Index Kit (12009360, Bio-Rad). Bead barcoding and sample indexing were performed following the standard protocol and the

(3) The single-cell chromatin accessibility landscape in mouse perinatal testis developmenteLifeApril 25, 2023Suen HC, Rao S, Luk ACS, Zhang R, Yang L, Qi H, So HC, Hobbs RM, Lee TL, Liao J.prepared using the SureCell ATAC-Seq Library Prep Kit (17004620, Bio-Rad) and SureCell ATAC-Seq Index Kit (12009360, Bio-Rad). Bead barcoding and sample indexing were performed with PCR amplification as follows: 37°C

(4) scATAC-Seq reveals heterogeneity associated with spermatogonial differentiation in cultured male germline stem cellsScientific ReportsDecember 12, 2022Hoi Ching Suen, Alfred Chun Shui Luk, Jinyue Liaoprepared using the SureCell ATAC-Seq Library Prep Kit (17004620, Bio-Rad) and SureCell ATAC-Seq Index Kit (12009360, Bio-Rad). Bead barcoding and sample indexing were performed with PCR amplification as follows: 37 °C

(5) Functional inference of gene regulation using single-cell multi-omicsCell GenomicsSeptember 1, 2022Vinay K. Kartha et al.prepared using the SureCell ATAC-Seq Library Prep Kit (17004620, Bio-Rad) and SureCell ddSEQ Index Kit (12009360, Bio-Rad). Bead barcoding and sample indexing were performed in a C1000 Touch™ Thermal cycler with a

(6) Deep learning-based enhancement of epigenomics data with AtacWorksNature communicationsMarch 8, 2021Lal A, Chiang ZD, Yakovenko N, Duarte FM, Israeli J, Buenrostro JD.prepared using the SureCell ATAC-Seq Library Prep Kit (17004620, Bio-Rad) and SureCell ATAC-Seq Index Kit (12009360, Bio-Rad). Bead barcoding and sample indexing were performed in a C1000 Touch thermal cycler with a

(7) Circulating miRNA Spaceflight Signature Reveals Targets for Countermeasure DevelopmentCell ReportsDecember 1, 2020Sherina Malkani et al.Bio-Rad). The SureCell ATAC-Seq Library Prep Kit (17004620, Bio-Rad) and SureCell ddSEQ Index Kit (12009360, Bio-Rad) were used to prepare scATAC libraries. Ampure XP beads (A63880, Beckman Coulter) were used

(8) Epigenomic State Transitions Characterize Tumor Progression in Mouse Lung AdenocarcinomaCancer cellAugust 10, 2020LaFave LM, Kartha VK, Ma S, Meli K, Del Priore I, Lareau C, Naranjo S, Westcott PMK, Duarte FM, Sankar V, et al.Kit,Bio-Rad,Cat# 17004620 Agencourt AMPure XP,Beckman Coulter,Cat# A63880 SureCell ddSEQ Index Kit,Bio-Rad,Cat# 12009360 Agilent High Sensitivity DNA Kit,Agilent,Cat# 5067-4626 "TC20 Cell Counting Kit, with Trypan Blue",Bio-Rad,Cat#

(9) Droplet-based combinatorial indexing for massive-scale single-cell chromatin accessibilityNature BiotechnologyAugust 1, 2019Caleb A. Lareau, Fabiana M. Duarte, Jennifer G. Chew, Vinay K. Kartha, Zach D. Burkett, Andrew S. Kohlway, Dmitry Pokholok, Martin J. Aryee, Frank J. Steemers, Ronald Lebofsky, et al.prepared using the SureCell ATAC-Seq Library Prep Kit (17004620, Bio-Rad) and SureCell ATAC-Seq Index Kit (12009360, Bio-Rad). Bead barcoding and sample indexing were performed in a C1000 Touch thermal cycler with a

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ddSEQ Single-Cell ATAC-Seq Index Kit

ddSEQ Single-Cell ATAC-Seq Index Kit from Bio-Rad

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ddSEQ Single-Cell ATAC-Seq Index Kit from Bio-Rad

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