Streamline Your Microarray Research
- Faster Microarray Assembly
- Guaranteed Product Quality
- Custom Selection Guaranteed Yields
Constructing high-quality
microarrays can be time consuming and requires optimizing yields and
overcoming the challenge of contamination.
QuikSpot™ PCR products*Ω
take the difficulties out of amplifying your own
cDNAs for microarrays. We offer ready-to-spot PCR products that are
guaranteed in quality and yield. Forget worrying about contamination
issues; we use a gene-specific primer to ensure that only the right PCR
products are generated.
Fast Microarray Assembly
QuikSpot PCR products are derived from our extensive
GeneConnection™ discovery clone collection that contains a combination of
both public and proprietary genes. By providing these products in a
ready-made format, we greatly simplify the process of preparing spotted
microarrays. By having your gene-specific PCR products already made, you
save valuable time by not having to perform amplifications. You can
customize your order by selecting only genes of interest or purchase
comprised sets. The GeneZoo™ and GeneJungle™ sets are collections of genes
organized as public- or nonpublic- based sequences.
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Figure 1
Insert-Specific Primers Using one
insert-specific primer and one vector-specific primer greatly
increases the quality and specificity of the QuikSpot™ PCR
products. |
Guaranteed Product Quality
Most PCR products are created using vector-specific primers
to amplify the entire cDNA insert. In contrast, we have increased the
quality and gene specificity of our PCR products by amplifying only the 3’
portion of the gene. We use one vector- specific primer and one
gene-specific primer to create the 300 to 600 base pair PCR product. This
eliminates the possibility of cross contamination between clones that can
occur when using only vector-specific primers across an entire PCR plate.
In addition, since the untranslated 3’ portion of the gene is the unique
portion of the sequence within gene families, expression analysis results
are more likely to be gene-specific, minimizing chances for
cross-hybridization with other similar sequences (Figure 1).
Gene-Specific Process Validation Sequence chromatogram obtained from our QuikSpot PCR
products. We used an internal primer, specific to this gene, along with a
vector primer in our PCR reaction. We purified this PCR product with an
ethanol precipitation and then ran a sequencing reaction using the same
internal primer that was used in the PCR reaction. The sequence we
obtained perfectly matched the expected sequence, verifying the process of
using a gene-specific primer. (Figure
2)

Custom Selection and Guaranteed Yields
Utilize our GeneConnection web portal to perform standard
database inquiries to scan for products of interest. The site supports
searches using Accession and UniGene numbers, key word and BLAST to allow
you to quickly identify products relevant to your area of research. Once
you have chosen the PCR products of interest, we prepare 1 to 3 micrograms
of material for you supplied in easy-to-use 96-well microplate format. We
guarantee 85% or higher amplification of our clones selected. You also
have a choice of selecting ethanol-precipitate purified or unpurified PCR
products (Figure 3).
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Figure 3
Ensure Yields Clones from the GeneJungle™ collection were amplified
using an internal gene-specific primer and a vector primer. The
product was ethanol precipitated before being run on a 0.7% agarose
gel along with a kb DNA ladder in 1X TBE. Lanes 2-8:
Individually amplified QuikSpot PCR products. Lane M:
Stratagene's kb DNA ladder. The PCR product must be of the correct
size (300 to 600 bp) and consist of only a single band in order to
pass our quality control specification. Densitometric analyses of
the known ladder bands are cross-compared to the PCR products to
guarantee amounts greater than 1 µg. Bands on the gel reflect the
quality and quantity of PCR products
generated. |
Contributing Scientists Stratagene: Becky
Mullinax, David Wong, Ronda Allen, Andrew Firmin
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