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Biocompare Home > Back > Finding The Best Microarray Scanner For Your Needs

Finding The Best Microarray Scanner For Your Needs

Jul 2 '07
In today’s fast paced world we need information – lots of it and fast. If you need buckets of data regarding the expression of genes, you should think about microarrays. And for a successful microarray project, it is essential to choose the appropriate hardware, which mainly consists of an arrayer and a scanner. Scanners are used to read microarrays, and it is critical to choose a model which best fits your needs. Some of the important questions you should ask yourself before purchasing a microarray scanner are as follows: is this a chemiluminescent or a confocal system (if confocal, which wavelengths are utilized? do you need to use fluorophores other then classical Cy3 and Cy5? Do you want an upgradeable model?)? What is the resolution range? Can the data be compared with other commercial platforms? Don’t forget to also acquire information about scanner sensitivity and spot to background ratio. Are you planning to use a variety of microarrays now or later? Then make sure that your system is compatible with several microarray providers. Use of microarray technology can give you an enormous amount of information about expression of thousands of genes. As this technique is rather costly, it is very important to use appropriate microarray scanners.

Andrzej Pietrzykowski, MD, PhD
Instructor
University of Massachusetts Medical School

  DNA Microarray Scanner from Agilent Technologies
Company Agilent Technologies
Item DNA Microarray Scanner
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Description New enhancements make scanning a breeze...and more enabling! Built on a strong engineering foundation and years of experience in the microarray scanner market, Agilent unleashes an enhanced-feature, powerful, fully-automated scanner with walk-away freedom.

The new, enhanced DNA microarray scanner is the first 48-slide scanning system that can read any mix of 1” x 3”...
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Catalog Number G2565BA
Speed Simultaneous 2-color scanning at 10 μm resolution, ~ 8 min./ slide
Sample Format Request Info
Resolution 5 or 10 μm
Sensitivity 0.05 chromophores per square micron
Software Feature Extraction Analysis software
Scan Area 21.6 mm x 71 mm
Excitation Wavelength 532 nm, 633 nm
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