Efficient Removal Genomic DNA Contamination From Total RNA Samples

University of Birmingham
Biosciences
Research Assistant

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Company:

Life Technologies

Product Name:

Turbo DNA-free Kit (50 reactions)

Catalog Number:

AM1907

Turbo DNase from Ambion Life Technologies has at least 50 times higher activity than conventional DNase I enzyme. I used to Turbo DNA free kit to remove genomic DNA contamination from RNA samples in-solution. After treatment with this enzyme, there was no detectable genomic DNA as checked by PCR.

Experimental Design and Results Summary

Application

Efficient removal of genomic DNA from Salmonella enterica total RNA samples

Starting Material

50 microliter of total RNA (less than 250 microgram/ml) from Salmonella enterica

Protocol Overview

First, I checked the quantity of total RNA present in my samples using Qubit based RNA quantification assay. All of my samples were less than 250 microgram/ml. Then I followed DNA digestion using Turbo DNase in a 50 microliter reaction volume as recommended by the kit's protocol. Used 1 microliter enzyme to digest genomic DNA. Remaining steps were followed exactly as mentioned in the kit's instructions. Finally Turbo DNase enzyme was removed and total RNA was transferred to fresh tube. Few aliquots of this DNase digested samples were used as template in a PCR reaction to check removal of the genomic DNA.

Tips

None

Results Summary

Efficient removal of genomic DNA contamination was noticed. All the sample treated with Turbo DNase did not had PCR product as analysed after running diagnostic PCR.

Additional Notes

None

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Summary

The Good

The protocol is very simple and involves table top mini centrifugation.

The Bad

None

The Bottom Line

Very good kit if you still see genomic DNA contamination even after on-column digestion with Qiagen DNase. Then use this Turbo DNA free kit to perform additional DNA digestion in-solution.

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