Great Antibody for FLAG immunoprecipitations

MMD
Laboratory Services Division, University of Guelph
Senior Technician

Overall

Quality of Results

Ease-of-Optimization

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Company:

Sigma Aldrich

Product Name:

ANTI-FLAG® antibody produced in rabbit

Catalog Number:

F7425-.2MG

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Our lab uses Anti-FLAG® M2 Magnetic Beads (produced in mouse, Sigma) for protein interaction co-immunoprecipitations. Invariably, some of the mouse antibody carries through with the eluted sample, especially as we generally use protein sample buffer for elution. This causes background in the western blot when detecting the FLAG epitope protein using a mouse-directed secondary antibody. A great way to avoid this problem is to use a FLAG antibody raised in rabbit, so that a rabbit-directed secondary may be used. The dramatically reduces background in a Western blot.

Experimental Design and Results Summary

Applications

Western blot

Sample

Protein samples from a co-immunoprecipitation

Primary Incubation

1:5000 in 5% skim milk in TBST, 4 degrees C, 16 hours

Blocking Agent

5% skim milk powder in TBST

Secondary Incubation

Goat anti-rabbit in 5% skim milk powder in TBST, 1 hour room temperature

Tertiary Incubation

NA

Detection

Enhanced Chemi-luminescence, exposure to film

Results Summary

The banding pattern should be clean, and at the correct size of the FLAG epitope containing protein.

Additional Notes

Antibody may be re-used if stored at 4 degrees C with sodium azide.

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Summary

The Good

Very clear Western blots with no antibody background from M2 beads.

The Bad

Expensive.

The Bottom Line

Great for anti-FLAG M2 agarose bead immunoprecipitations.

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